Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015929603.1_cds_XP_016476862.1_68651
CDS Infomation

[gene=LOC107798399] [db_xref=GeneID:107798399] [protein=U3 small nucleolar RNA-associated protein 18 homolog] [protein_id=XP_016476862.1] [location=84292..85794] [gbkey=CDS]
Sequence

ATGAAGAAGCTTGAGAACTTATTGTTTGGCTCCTTGTACAATTCTGTTGGGTTCGGGAAG
GACGATGAAGAAGAAAAGAGAAATGATGGCGAAAACGATTCTGCTATGTTCTTTGTGGAC
CGGTTTGCGGATAGTGCGTTGTCTGTTTATGAGGGGGATGCACAGCTGGTGCCACAAGGT
ATCCACATTGTGGGAAAGGAGGAGCGGAAACCGGTGTGGGTAGATGACGCAGAAGAGAAG
ACTAGTATCAAAATAGCAAGCGTGAACAGATTGAGGAAGCTGAGGAAAGAAGAGGGTGAG
GATGTCATATCTGGTTCCACGTACGTGGCGAGACTAAGGGCTCAACACGCTAAACTTAAT
CCAGGCACTGAATGGGCCCAAATTGATTCTCAAGGCATAAGCTACAGTTCTGATGATGAA
GATTCTGACGAGGAAAGTAAACATACTGAGGGCTACGGTTCAAAGAATGTCAAGTTGGTC
GGTGATATTCTTCAATCAAACGAAGATCTTGTTGTCAAAAGTCGCACAAAGTTGTTACCT
GGGCTTCTTGAATATTCGAGACTGGTTGATGCAAATGCACCTGATCCTTCAAATGCACCA
ATAAATTCTGTTCAGTTCCACAGGAATTCTCAGTTGCTCCTTGTTGGTGGATTGGATAAA
AAACTCAGATTTTTTCAGATTGACGGGAAACGAAATACAAAGATACAGAGCATCTTTCTT
GAGGATTTTCCAATTAAAAAGGCATCTTTCTTACCCAATGGGTGTCAAGTTATTATATCA
GGAAGAAGAAAGTTCTTTCATGTCTTAGACTTGGTCAAAGCAAGTGTAGATAAAATAGGT
CCTCTAGTCGGCAGGGAAGAAAAGAGCCTGGAAAGTTTTGAGGTTTCTCCTGATTCAGAT
ACAATTGCTTTTCTTGGTAATGAAGGATACATTTTGCTAGTTTCCTCCAAAACAAAGGAG
CTAATTGGGTCACTGAAAATGAATGGAACTGTTCGCTCAGTGGCTTTCACCAATGACGGA
CAACAATTATTGAGCTCTGGTGGAGACAGCCAGATTTACCATTGGGATTTGAGAACAAGA
ACTTGCATTCATAAAGGTGTTGATGAAGGGTCCATAAATGGTACGGCTCTTTGCACTTCA
CCAAATGGTAGTTTGTTTGCTGCTGGTTCAGACAGCGGGATAGTAAATATTTATAACAGA
GAAGAGTTTTTGGGCGGAAAGAGAAAACCAATCAAGGCGATTGAGAATCTCACAACGAAA
GTGGATTTTATGAAATTCAATCATGATGCTCAAATATTAGCCATCAGTTCTAGCATGAAG
AAAAACAGCTCAAAGCTAATTCACATTCCATCATTTACAGTTTTTTCAAACTGGCCTTCT
CCAAATCAAGCCGTGCACTATCCGCTCTGTTTGGATTTTAGTCCTCATGGAGGATTCATG
GCTATGGGAAATGCTGAAGGAAAAGTGTTACTGTACAAGTTGCATCACTACCATGATGCA
TAG

Peptide Sequence

PEP ID

XP_016476862.1
PEP Infomation

PREDICTED: U3 small nucleolar RNA-associated protein 18 homolog [Nicotiana tabacum]
Sequence

MKKLENLLFGSLYNSVGFGKDDEEEKRNDGENDSAMFFVDRFADSALSVYEGDAQLVPQG
IHIVGKEERKPVWVDDAEEKTSIKIASVNRLRKLRKEEGEDVISGSTYVARLRAQHAKLN
PGTEWAQIDSQGISYSSDDEDSDEESKHTEGYGSKNVKLVGDILQSNEDLVVKSRTKLLP
GLLEYSRLVDANAPDPSNAPINSVQFHRNSQLLLVGGLDKKLRFFQIDGKRNTKIQSIFL
EDFPIKKASFLPNGCQVIISGRRKFFHVLDLVKASVDKIGPLVGREEKSLESFEVSPDSD
TIAFLGNEGYILLVSSKTKELIGSLKMNGTVRSVAFTNDGQQLLSSGGDSQIYHWDLRTR
TCIHKGVDEGSINGTALCTSPNGSLFAAGSDSGIVNIYNREEFLGGKRKPIKAIENLTTK
VDFMKFNHDAQILAISSSMKKNSSKLIHIPSFTVFSNWPSPNQAVHYPLCLDFSPHGGFM
AMGNAEGKVLLYKLHHYHDA

Transcript Sequence

Gene sequence data has not been registered.